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A genetic overview of Atlantic coastal populations from Europe and North-West Africa based on a 17 X-STR panel.

Identifieur interne : 000357 ( Main/Exploration ); précédent : 000356; suivant : 000358

A genetic overview of Atlantic coastal populations from Europe and North-West Africa based on a 17 X-STR panel.

Auteurs : Endika Prieto-Fernández [Espagne] ; Ana Díaz-De Usera [Espagne] ; Miriam Baeta [Espagne] ; Carolina Nú Ez [Espagne] ; Faiza Chbel [Maroc] ; Sellama Nadifi [Maroc] ; Karen Rouault [France] ; Claude Férec [France] ; Orla Hardiman [Irlande (pays)] ; Fátima Pinheiro [Portugal] ; Marian M. De Pancorbo [Espagne]

Source :

RBID : pubmed:27931869

Descripteurs français

English descriptors

Abstract

The forensic use of X-STRs requires the creation of allele and haplotype frequency databases in the populations where they are going to be used. Recently, an updated Spanish allele and haplotype frequency database for the new 17 X-STR panel has been created, being the only database available up to now for this new multiplex. In order to broaden the forensic applicability of the 17 X-STR panel, 513 individuals from four different populations located on the Atlantic Coast of Europe and North-West Africa have been studied, i.e. Brittany (France), Ireland, northern Portugal, and Casablanca (Morocco). Allele and haplotype frequency databases, as well as parameters of forensic interest for these populations are presented. The obtained results showed that the 17 X-STR panel constitutes a highly discriminative tool for forensic identification and kinship testing in the studied populations. Furthermore, we aimed to study if these populations located on the Atlantic coast actually share alike allele and haplotype frequency distributions since they have experienced genetic exchanges throughout history. This would allow creating larger forensic databases that include several genetically similar populations for its use in forensic casework. For this purpose, pairwise FST genetic distances between the analyzed populations and others from the Atlantic Coast previously studied with the 17 X-STR panel or the ten coincident markers included in the decaplex of the GHEP-ISFG were estimated. Our results suggest that certain nearby populations located on the European Atlantic coast could have underwent episodes of genetic interchange as they have not shown statistically significant differentiation between them. However, the population of Casablanca showed significant differentiation with the majority of the European populations. Likewise, the autochthonous Basque Country and Brittany populations have shown distinctive allele frequency distributions between them. Therefore, these findings seem to support that the use of independent allele and haplotype frequency databases for each population instead of a global database would be more appropriate for forensic purposes.

DOI: 10.1016/j.fsigen.2016.11.011
PubMed: 27931869


Affiliations:


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Le document en format XML

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<div type="abstract" xml:lang="en">The forensic use of X-STRs requires the creation of allele and haplotype frequency databases in the populations where they are going to be used. Recently, an updated Spanish allele and haplotype frequency database for the new 17 X-STR panel has been created, being the only database available up to now for this new multiplex. In order to broaden the forensic applicability of the 17 X-STR panel, 513 individuals from four different populations located on the Atlantic Coast of Europe and North-West Africa have been studied, i.e. Brittany (France), Ireland, northern Portugal, and Casablanca (Morocco). Allele and haplotype frequency databases, as well as parameters of forensic interest for these populations are presented. The obtained results showed that the 17 X-STR panel constitutes a highly discriminative tool for forensic identification and kinship testing in the studied populations. Furthermore, we aimed to study if these populations located on the Atlantic coast actually share alike allele and haplotype frequency distributions since they have experienced genetic exchanges throughout history. This would allow creating larger forensic databases that include several genetically similar populations for its use in forensic casework. For this purpose, pairwise F
<sub>ST</sub>
genetic distances between the analyzed populations and others from the Atlantic Coast previously studied with the 17 X-STR panel or the ten coincident markers included in the decaplex of the GHEP-ISFG were estimated. Our results suggest that certain nearby populations located on the European Atlantic coast could have underwent episodes of genetic interchange as they have not shown statistically significant differentiation between them. However, the population of Casablanca showed significant differentiation with the majority of the European populations. Likewise, the autochthonous Basque Country and Brittany populations have shown distinctive allele frequency distributions between them. Therefore, these findings seem to support that the use of independent allele and haplotype frequency databases for each population instead of a global database would be more appropriate for forensic purposes.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>Espagne</li>
<li>France</li>
<li>Irlande (pays)</li>
<li>Maroc</li>
<li>Portugal</li>
</country>
<region>
<li>Pays basque</li>
<li>Région Bretagne</li>
</region>
<settlement>
<li>Brest</li>
</settlement>
<orgName>
<li>Université de Bretagne Occidentale</li>
</orgName>
</list>
<tree>
<country name="Espagne">
<region name="Pays basque">
<name sortKey="Prieto Fernandez, Endika" sort="Prieto Fernandez, Endika" uniqKey="Prieto Fernandez E" first="Endika" last="Prieto-Fernández">Endika Prieto-Fernández</name>
</region>
<name sortKey="Baeta, Miriam" sort="Baeta, Miriam" uniqKey="Baeta M" first="Miriam" last="Baeta">Miriam Baeta</name>
<name sortKey="De Pancorbo, Marian M" sort="De Pancorbo, Marian M" uniqKey="De Pancorbo M" first="Marian M" last="De Pancorbo">Marian M. De Pancorbo</name>
<name sortKey="Diaz De Usera, Ana" sort="Diaz De Usera, Ana" uniqKey="Diaz De Usera A" first="Ana" last="Díaz-De Usera">Ana Díaz-De Usera</name>
<name sortKey="Nu Ez, Carolina" sort="Nu Ez, Carolina" uniqKey="Nu Ez C" first="Carolina" last="Nú Ez">Carolina Nú Ez</name>
</country>
<country name="Maroc">
<noRegion>
<name sortKey="Chbel, Faiza" sort="Chbel, Faiza" uniqKey="Chbel F" first="Faiza" last="Chbel">Faiza Chbel</name>
</noRegion>
<name sortKey="Nadifi, Sellama" sort="Nadifi, Sellama" uniqKey="Nadifi S" first="Sellama" last="Nadifi">Sellama Nadifi</name>
</country>
<country name="France">
<region name="Région Bretagne">
<name sortKey="Rouault, Karen" sort="Rouault, Karen" uniqKey="Rouault K" first="Karen" last="Rouault">Karen Rouault</name>
</region>
<name sortKey="Ferec, Claude" sort="Ferec, Claude" uniqKey="Ferec C" first="Claude" last="Férec">Claude Férec</name>
</country>
<country name="Irlande (pays)">
<noRegion>
<name sortKey="Hardiman, Orla" sort="Hardiman, Orla" uniqKey="Hardiman O" first="Orla" last="Hardiman">Orla Hardiman</name>
</noRegion>
</country>
<country name="Portugal">
<noRegion>
<name sortKey="Pinheiro, Fatima" sort="Pinheiro, Fatima" uniqKey="Pinheiro F" first="Fátima" last="Pinheiro">Fátima Pinheiro</name>
</noRegion>
</country>
</tree>
</affiliations>
</record>

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